Presentations

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Epiverse-TRACE: A collaborative software ecosystem for outbreak analysis and modelling

R
R packages
outbreak analytics
conference
community
This presentation (18 minutes, plus 5 minutes for questions) was delivered at the inaugural Infectious Disease Modelling (IDM) Conference in Bangkok, Thailand on 8th…
Nov 8, 2024
Joshua W. Lambert

 

Demo: Comparing vaccination strategies with finalsize

R
R packages
finalsize
This presentation was given for a GPSSD lecture in their “Climate and Health Data in Action” curriculum on October 9, 2024.
Oct 9, 2024
Hugo Gruson

 

Common analytics tasks and available R tools/packages

R
R packages
outbreak analytics
This presentation (15 min including questions) was given at the WHO Mpox Analytics Collaboratory seminar on September 5, 2024.
Sep 18, 2024
James Mba Azam

 

The twin peaks of the global and the local: worldwide and modest infrastructures for global health

localism
social science
TRACE-LAC
Presentation (30min including questions) at the Biannual Conference of the Society for Social Studies of Science (4S) and the European Association for the Study of Science…
Jul 19, 2024
Miller Díaz Valderrama, Natalia Niño-Machado, Catalina González-Uribe

 

Interoperability between {epireview} & Epiverse-TRACE

R
interoperability
object orientation
ecosystem
Presentation (15 minutes) at the Epireview hackathon hosted by Imperial College London. The hackathon was attended by the Pathogen Epidemiology Review Group (PERG) at…
Jul 11, 2024
Joshua W. Lambert

 

Building Interoperability in Existing Software Ecosystems with S3 Classes

R
S3
object orientation
interoperability
ecosystem
good practices
progressive enhancement
data frame
Presentation (20min including questions) at the useR!2024 conference, under the “R workflow + deployment + production” category.
Jul 9, 2024
Hugo Gruson

 

Epiverse-TRACE @ FOSDEM 2024: From disconnected elements to a harmonious ecosystem

interoperability
ecosystem
R
R packages
These slides were prepared for a lightning talk at FOSDEM 2024, in the “Public Code and Digital Public Goods” devroom, organized by the Foundation for Public Code and the Dig…
Feb 3, 2024
Hugo Gruson

Epiverse-TRACE Autumn 2023 showcase

readepi
cleanepi
pipeline demo
showcase
This showcase is part of a regular cycle of online meetings to present tools for epidemiology.
Nov 30, 2023
Carmen Tamayo, Karim Mané, Abdoelnaser Degoot, Bankole Ahadzie

 

Epiverse-TRACE LAC @ LatinR

TRACE-LAC
R
Latin America
serofoi
Epi-training kit
Presentaciones de Epiverse-TRACE LAC en la conferencia LatinR 2023, en Montevideo, Uruguay.
Oct 10, 2023
Laura Gómez Bermeo, Nicolás T. Domínguez, Diana Fajardo Pulido

Interoperability strategy for the Epiverse

interoperability
ecosystem
R
R packages
This presentation was done internally to the Epiverse-TRACE team, and to the Epiverse-TRACE funders.
Oct 1, 2023
Hugo Gruson

Co-diseño de soluciones de software para los desafíos de América Latina y el Caribe en enfermedades infecciosas

Co-designing software solutions for the challenges of Latin America and the Caribbean in infectious diseases
co-design
Colombia
Latin America
The lead researcher Catalina González-Uribe, from UniAndes Team, along with other members of Epiverse-TRACE in Latin America, presented the work “Co-designing software…
Sep 15, 2023
Catalina González-Uribe

 

Global Health Resilience Research Visit

Harmonize
workshop
interoperability
community
climate
Three talks at a workshop at the Barcelona Supercomputing Center titled: Global Health Resilience Research Visit. The workshop established a collaboration between…
Jul 26, 2023
Adam Kucharski, Joshua W. Lambert, Carmen Tamayo

 

Superseding R packages - lessons learned from transitioning to {epichains} from {bpmodels}

workshop
community
R package
bpmodels
epichains
This was a lightning talk at a workshop at the RSLondonSouthEast2023 workshop held at the Imperial College London’s South Kensington Campus. The talk was entitled…
Jul 17, 2023
James M. Azam

 

Juniper seminar on improving software for epidemic response

epiparameter
finalsize
episoap
Talk at the Juniper seminar series that included a large section on our efforts to improve the sustainability and interoperability of outbreaks analysis tools, covering…
May 31, 2023
Adam Kucharski

Epiverse-TRACE Spring 2023 showcase

sivirep
epiCo
serofoi
showcase
This showcase is part of a regular cycle of online meetings to present tools for epidemiology.
Apr 5, 2023
Anna Carnegie, Geraldine Gómez Millán, Juan Daniel Umaña, Nicolás Torres

From disconnected elements to a harmonious ecosystem: The Epiverse-TRACE project

data science
pipelines
interoperability
community
deRSE23
This presentation was given as part of deRSE23 - Conference for Research Software Engineering in Germany, in the Integration vs. Modularity session.
Feb 20, 2023
Hugo Gruson

Epiverse-TRACE Winter 2023 showcase

epiparameter
finalsize
episoap
showcase
This showcase is part of a regular cycle of online meetings to present tools for epidemiology.
Jan 25, 2023
Anna Carnegie, Pratik Gupte, Joshua Lambert, Hugo Gruson
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